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Image Search Results
Journal: Bioinformatics Advances
Article Title: Revealing tissue architecture through the hypercomplex Fourier analysis of spatial transcriptomics data
doi: 10.1093/bioadv/vbaf191
Figure Lengend Snippet: Visualization of 10× Visium HD spatial transcriptomics data for coronal mouse brain slice. The H&E stained image is displayed behind a visualization of the Visium spots colored according to the number of UMI counts.
Article Snippet: To illustrate the proposed quaternion model and the ST visualization, rotation and hypercomplex Fourier analysis applications, we analysed a 10× Visium HD ST dataset generated on a
Techniques: Slice Preparation, Staining
Journal: Bioinformatics Advances
Article Title: Revealing tissue architecture through the hypercomplex Fourier analysis of spatial transcriptomics data
doi: 10.1093/bioadv/vbaf191
Figure Lengend Snippet: Visualization of quaternion mapping for coronal mouse brain slice Visium HD data. The left panel shows the SVD model and the right panel shows a mapping based on the rank 20 reconstructed expression of the GFAP, Reln, and Neurod6 genes, which are markers for astrocytes, interneurons and excitatory neurons and are mapped to red, green, and blue respectively.
Article Snippet: To illustrate the proposed quaternion model and the ST visualization, rotation and hypercomplex Fourier analysis applications, we analysed a 10× Visium HD ST dataset generated on a
Techniques: Slice Preparation, Expressing